Growth in rich or minimal media

List of datasets that measure growth in rich or minimal media. These may be standalone experiments or controls within larger studies of chemical and/or physical perturbations.

Datasets

Paper Phenotype Condition Medium Collection Tested mutants Data Details
Breslow DK~Weissman JS, 2008 growth (relative abundance in pooled culture) standard SGA final selection medium hap a 4,179 Quantitative
Merz S~Westermann B, 2009 growth (spot assay) standard YPG [3%] hap alpha 4,894 Discrete
Wilson MA~van Hoof A, 2007 growth (undefined) standard SC - His hap a 4,785 Discrete
Yoshikawa K~Shimizu H, 2011 growth (exponential growth rate) standard SC + raffinose + galactose hap alpha 4,703 Quantitative
Luban C~Schmidt U, 2005 growth (undefined) standard YPG [3%] hap a 4,749 Discrete
Dimmer KS~Westermann B, 2002 growth (undefined) standard YPG [2%] hom 4,703 Discrete
Deutschbauer AM~Giaever G, 2005 growth (relative abundance in pooled culture) standard YPD het 5,773 Quantitative
Deutschbauer AM~Giaever G, 2005 growth (relative abundance in pooled culture) standard SD + His + Leu + Ura het 5,668 Quantitative
Baryshnikova A~Myers CL, 2010 growth (colony size) standard SGA final selection medium hap a/hap alpha 4,602 Quantitative
Berry DB~Gasch AP, 2011 growth (relative abundance in pooled culture) standard YPD hom 4,564 Quantitative
Brown JA~Brown JM, 2006 growth (relative abundance in pooled culture) standard YPD hom 4,283 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPG [3%] het 5,772 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPE [2%] het 5,744 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPL het 5,744 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPDGE het 5,744 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPG [3%] hom 4,723 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPE [2%] hom 4,723 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPL hom 4,723 Quantitative
Steinmetz LM~Davis RW, 2002 growth (relative abundance in pooled culture) standard YPDGE hom 4,723 Quantitative
Dudley AM~Church GM, 2005 growth (spot assay) standard YPG [3%] hom 4,621 Discrete
Dudley AM~Church GM, 2005 growth (spot assay) standard YPL [2%] hom 4,621 Discrete
Dudley AM~Church GM, 2005 growth (spot assay) standard YPD [low-phosphate] hom 4,621 Discrete
Deutschbauer AM~Giaever G, 2005 growth (relative abundance in pooled culture) standard YPD hom 4,731 Quantitative
Deutschbauer AM~Giaever G, 2005 growth (relative abundance in pooled culture) standard SD + His + Leu + Ura hom 4,670 Quantitative
Berry DB~Gasch AP, 2011 growth (relative abundance in pooled culture) standard YPD hom 4,455 Quantitative
Hillenmeyer ME~Giaever G, 2008 growth (relative abundance in pooled culture) standard SD het 5,701 Quantitative
Bell G, 2010 growth (culture turbidity) standard YPD hap a ~4,846 Quantitative
Bell G, 2010 growth (culture turbidity) standard SD hap a ~4,846 Quantitative
Bell G, 2010 growth (culture turbidity) standard YPE [2%] hap a ~4,846 Quantitative
Bell G, 2010 growth (culture turbidity) standard maple sap hap a ~4,846 Quantitative
Bell G, 2010 growth (culture turbidity) standard infusion of leaves hap a ~4,846 Quantitative
Bell G, 2010 growth (culture turbidity) standard infusion of bark hap a ~4,846 Quantitative
Salignon J~Yvert G, 2018 growth (relative abundance in pooled culture) standard SC hom 3,540 Quantitative
Salignon J~Yvert G, 2018 growth (relative abundance in pooled culture) standard SC - Met hom 3,540 Quantitative
Warringer J~Blomberg A, 2003 growth (exponential growth rate) standard SC hap a 4,711 Quantitative
Warringer J~Blomberg A, 2003 growth (lag phase) standard SC hap a 4,711 Quantitative
Warringer J~Blomberg A, 2003 growth (stationary phase cell density) standard SC hap a 4,704 Quantitative
Hartman JL 4th~Tippery NP, 2004 growth (AUC) standard SC hap a 4,757 Quantitative
Giaever G~Johnston M, 2002 growth (relative abundance in pooled culture) standard YPD hom 4,715 Quantitative only for hits
Payen C~Dunham MJ, 2016 growth (relative abundance in pooled culture) standard SD + phosphate limitation hap a N/A Quantitative
Payen C~Dunham MJ, 2016 growth (relative abundance in pooled culture) standard SD + glucose limitation hap a N/A Quantitative
Payen C~Dunham MJ, 2016 growth (relative abundance in pooled culture) standard SD + sulfate limitation het N/A Quantitative
Payen C~Dunham MJ, 2016 growth (relative abundance in pooled culture) standard SD + glucose limitation het N/A Quantitative
Payen C~Dunham MJ, 2016 growth (relative abundance in pooled culture) standard SD + phosphate limitation het N/A Quantitative
Bell G, 2010 growth (culture turbidity) standard birch sap hap a ~4,846 Quantitative
Sliwa P~Korona R, 2005 growth (general) standard YPD hom ~4,653 Quantitative only for hits