Liao C~Panaretou B, 2007

Pubmed ID 17093137
Title Genomic screening in vivo reveals the role played by vacuolar H+ ATPase and cytosolic acidification in sensitivity to DNA-damaging agents such as cisplatin.
Authors Chunyan Liao, Bin Hu, Matthew J Arno, Barry Panaretou
Abstract Screening the Saccharomyces cerevisiae homozygous diploid deletion library against a sublethal concentration of cisplatin revealed 76 strains sensitive to the drug. As expected, the largest category of deletions, representing 40% of the sensitive strains, was composed of strains lacking genes involved in DNA replication and damage repair. Deletions lacking function of the highly conserved vacuolar H+ translocating ATPase (V-ATPase) composed the category representing the second largest number of sensitive strains. The effect on cell death exhibited by V-ATPase mutants was found to be a general response to various DNA damaging agents as opposed to being specific to cisplatin, as evidenced by sensitivity of the mutants to hydroxyurea (a DNA-alkylating agent) and UV irradiation. Loss of V-ATPase does not affect DNA repair, because double mutants defective for V-ATPase function and DNA repair pathways were more sensitive to cisplatin than the single mutants. V-ATPase mutants are more prone to DNA damage than wild-type cells, indicated by enhanced activation of the DNA damage checkpoint. Vacuole function per se is not cisplatin-sensitive, because vacuolar morphology and vacuolar acidification were unaffected by cisplatin in wild-type cells. V-ATPase also controls cytoplasmic pH, so the enhanced sensitivity to DNA damage may be associated with the drop in pHi associated with V-ATPase mutants. The increased loss in cell viability induced by cisplatin at lower pH in V-ATPase mutants supports this hypothesis. The loss in viability seen in wild-type cells under the same conditions was far less dramatic.
Citation Mol. Pharmacol. 2007; 71:416-25
Data abstract Deletion collection was assayed for growth on cisplatin (DNA damaging agent).


Download the list of datasets
Paper Phenotype Condition Medium Collection Tested mutants Data Details
Liao C~Panaretou B, 2007 growth (spot assay) cisplatin [250 uM] YPD hom 4,688 Discrete

Curation history

Tested strains

Sept. 21, 2016 To request.
May 5, 2017 Request sent.
May 8, 2017 Ready to load.
June 14, 2017 Loaded.


Sept. 21, 2016 Waiting for tested.
May 8, 2017 Ready to load.
June 14, 2017 Loaded.