Novarina D~Chang M, 2020

Pubmed ID 32265288
Title Saccharomyces cerevisiae.
Authors Daniele Novarina, Ridhdhi Desai, Jessica A Vaisica, Jiongwen Ou, Mohammed Bellaoui, Grant W Brown, Michael Chang
Abstract Saccharomyces cerevisiae for genes that, when deleted, cause hyper-recombination between direct repeats. One was performed with the classical patch and replica-plating method. The other was performed with a high-throughput replica-pinning technique that was designed to detect low-frequency events. This approach allowed us to validate the high-throughput replica-pinning methodology independently of the replicative aging context in which it was developed. Furthermore, by combining the two approaches, we were able to identify and validate 35 genes whose deletion causes elevated spontaneous direct-repeat recombination. Among these are mismatch repair genes, the Sgs1-Top3-Rmi1 complex, the RNase H2 complex, genes involved in the oxidative stress response, and a number of other DNA replication, repair and recombination genes. Since several of our hits are evolutionarily conserved, and repeated elements constitute a significant fraction of mammalian genomes, our work might be relevant for understanding genome integrity maintenance in humans.
Citation G3 (Bethesda) 2020; 10:1853-1867

Datasets

Curation history

Tested strains

Sept. 12, 2020 Undefined.

Data

Sept. 12, 2020 Undefined.